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If TurboTax is indicating that your traditional IRA contribution is nondeductible, it is because the information that you have entered to this point indicates that your modified AGI is above the threshold for your filing status for being able to deduct the contribution and you or your spouse is covered by a retirement plan at work. Since you are self employed, that workplace retirement plan would be a SEP, SIMPLE or Keogh plan (including an individual 401(k)). If you had insufficient eligible compensation, TurboTax would instead indicate that your contribution is an excess contribution rather than simply being nondeductible.
See this IRS web page regarding income thresholds: https://www.irs.gov/retirement-plans/ira-deduction-limits
As macuser_22 indicated, net income from self-employment available to support a personal traditional IRA contribution is your net profit from self-employment minus the deductible portion of SE taxes shown on Form 1040 line 27, further reduced by any self-employed retirement contribution shown on Form 1040 line 28.
This is still confusing to me because the rules for the Savers Credit (formerly "retirement savings contribution credit") say you can get a deduction for Roth IRAs:
www.irs.gov/pub/irs-drop/a-01-106.pdf
I am also not over the limit and yet Turbo Tax will not give me the credit on past returns I am trying to amend.
Nowhere does that reference say that you get a deduction for a Roth IRA contribution. Tax deductions and tax credits are two different things. If the requirements are met, you can get a tax credit (the Retirement Savings Contributions Credit) for Roth IRA contribution, not a tax deduction.
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