When you enter the 1099-R, there will be followup questions to answer as you Continue through the interview for that form. One of those screens may ask for the source of the form, and that screen is especially important because it can determine if the money is taxable in your state or not. In addition to the questions int he Federal, if there is anything about the distribution not covered in the Federal program, there will be additional questions as you go through the state program.