No, on your husband's MFS return to Virginia, he will report only his Virginia income and his share of the rental income. Look for screens in the VA interview that will allow you to adjust the amount carried over from your joint federal return to indicate the VA portion of wages, interest, and rental income.
On your California return, you'll report all your joint incomes, but claim a deduction for tax paid to Virginia.
Here's more info from VA Dept. of Taxation and from CA FTB.
@Totoro88
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