Yes, if you have a Form 1099-R for the rollover you will enter it into TurboTax. Please see Where do I enter my 1099-R? In the follow-up questions you can indicate it was a rollover.
If it was a trustee-to-trustee transfer from one IRA to another IRA and you do not receive a Form 1099-R then you do not need to report it on your return.
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