You need to enter the amount you paid with the state extension.
To enter, change or delete a payment made with an extension request (Federal, State, Local) -
Click on Federal Taxes (Personal using Home and Business)
Click on Deductions and Credits
Click on I'll choose what I work on (if shown)
Scroll down to Estimates and Other Taxes Paid
On Income Taxes Paid, click on the start or update button
On the next screen select the type of extension payment made and click on the start or update button