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Keep going through the interview; there are follow-up questions. To report a qualified charitable distribution on your Form 1040 tax return, you'll use the 1099-R (even though there's no indication that it was a QCD). Enter the info as a 1099-R and you'll be asked in one of the follow-up question if it was a Qualified Charitable Distribution.
TurboTax includes the full amount of the distribution reported on your Form 1099-R on line 4a (IRA Distributions) of your Form 1040. The taxable amount reported on Line 4b will be the total distribution less the QCD amount and will have "QCD" entered next to it. Check the qualifications below to ensure you qualify.
QCDs are limited to the amount that would otherwise be taxed as ordinary income. This excludes non-deductible contributions. If your IRA includes nondeductible contributions, the distribution is first considered to be paid out of otherwise taxable income.
A distribution made directly to the IRA owner, who then gives it to a charity, doesn't qualify as a QCD.
Qualifications
There are requirements for the charity too, see the full FAQ
I don't ever get a question on if it was a Qaulified Charitable Distribution - only get questions around it being a Qualified Disaster distribution.
Is the recipient of the 1099-R income 70 1/2 years or older? Verify the date of birth of the recipient at My Info.
Can I make a QCD?
While many IRAs are eligible for QCDs—Traditional, Rollover, Inherited, SEP (inactive plans only), and SIMPLE (inactive plans only)* —there are requirements:
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