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It is already a "deduction", because it is not included in Box 1 of your W-2. You and your employer's contributions both appear in Box 12 Code W on your W-2. You do need to make sure to enter that you have carried a high-deductible plan so the contributions are not added back to your income. This can be checked in Federal Taxes > Deduction & Credits > HSA, MSA Contributions.
If the entire amount of 2023 HSA contributions appeared with code W in box 12 of your 2023 W-2 and your 2023 tax return shows a deduction on Schedule 1 line 13, you've filed an incorrect 2023 tax return and you need to amend it to remove this deduction to which you were not entitled.
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