I see your return, and the issues.
First, "In 2025, the total family contribution were $1,000 below the IRS family limit. ( both 55+ years old ) ." Shame on me, I took this at face value. In f...
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I see your return, and the issues.
First, "In 2025, the total family contribution were $1,000 below the IRS family limit. ( both 55+ years old ) ." Shame on me, I took this at face value. In fact, your annual HSA contribution that is shared by both spouses is the Family amount, the Self coverage is ignored for purposes of the annual HSA contribution limit calculation.
So, your HSA contribution limit shared by the two of you is $8,550. In addition, there is a $1,000 bump for dollars going into your HSA, and $1,000 going into your spouse's HSA, so, in effect a limit of $10,550 (but no more than $9,550 going into one HSA or the other).
This is explained (opaquely) on page 6 of Pub 969 under "Rules for married people".
So you have in fact an excess of $2,028, which is what TurboTax is telling you.
Second, "In February 2026, the husband asks the HSA custodian, to withdraw $2,000 from the 2025 HSA contributions, so that there will be no longer excess in HSA being carried over. "
The 1099-SA showed a code of '1', (not '2', which would be normal for a "withdrawal of excess contributions"). You have to specify this exact phrase to the HSA custodian or they will give you a normal distribution (code '1'), which is what you got.
Furthermore, you marked this as "all for medical expenses", which means that it could not be used to reduce the carryover.
In any case, it doesn't matter that you weren't asked about the "If you already withdrew your excess contribution, you still need to include it here. We'll ask about withdrawn contributions next. " You didn't withdraw any excess contributions in any case (code '2' on the 1099-SA).
The missing screen about giving you the option to withdraw the excess or carry it over...in your situation, TurboTax is just carrying over the $2,028 to 2026. It is charging you an excess tax of 6% in the process (line 49 in Part VII on the 5329).
I suggest that now that you know that your annual HSA contribution limit is much less than you thought, that you allow space for an extra $2,028 as a personal contribution in 2026 - this will use up the carryover, and you will be done with it. That is, don't contribute more next year than the Family total + $1,000 + $1,000 - $2,028. Remember that at least $1,000 must go into each HSA.