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1. I was self-employed for 7 mo. this year, W2 for the other months. My husband is employed (regular W2). Can we file married jointly in April since I am supposed to make a quarterly payment by January 15? 2. For my quarterly payment to the IRS do I take out my tax deductions? Do I pay the EFTPS the amount in January that turbotax says I owe with my deductions? Do I need to file anything on turbotax if I pay the EFTPS? 3. Do I pay again in April if I pay my last quarterly payment in January? (I no longer have the 1099 job)
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Yes, you can file as married filing jointly even if you did not make the estimated payments related to your self-employment income. You will be able to pay all the income and employment taxes related to your self-employment business with your personal tax return (if you are filing a Schedule C for your self-employment business).
If you decide to make an online estimated payment on Jan 15th, 2018 that applies to your 2017 self-employment income, you will be able to add this payment amount to your 2017 income tax return (see below). You should base your estimated payment on the net self-employment income plus half (the employer share) of the employment taxes on your self-employment income.
Here is information on how you enter your estimated payments in TurboTax:
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