I'm not seeing any change on the Pennsylvania income tax return in either the amount due or income when I enter a PA amount in the RK-1 section.
If you PA amount is different, TurboTax will use the PA amount instead of federal. If they are the same you can just check the box that you are using RK-1 and leave the PA column blank.
The only other thing I can think of is that you have more than one KRK-1 and you are adding taxpayer amounts to the spouse column or vice versa.