Yes. When you enter your 1099-R continue to the screen Do any of these situations apply to you? select I transferred all or part of this money directly to charity.
A qualified charitable distribution (QCD) is a distribution from an IRA made directly by the trustee of the IRA to a qualified charity. A QCD reduces the amount of your IRA distribution that you are required to recognize as income.
You must be at least 70 1/2 years old on the day of the distribution.