I have a S Corp, I prepare 1099's & W2's, will Turbo Tax Business Electronically send the forms to the correct agencies for reporting purposes?
TurboTax will send them to the IRS and SSA (but not to state agencies) if you prepare them through Quick Employer Forms - see information below.
https://ttlc.intuit.com/replies/3301452
Quick Employer Forms - FAQ
https://quickemployerforms.intuit.com/faq.htm