Taxes owed and filing fee are different.
The zero (0) payment at the time of e-filing indicates you are allowed to file both returns (Fed and State) for free, no charge.
The amount of taxes you owe is a separate issue. The taxes owed to Fed and State will not be 'directly debited' from your bank account. You'll be able to pay by credit card (which can be a debit card) or print the Payment Voucher for Fed and State, and mail the voucher with a check to the Federal and State governments.