More clarification is needed to answer this question: What New York form is TurboTax directing you to?
If your W-2 shows that an amount was deducted from your salary under a flexible benefits program established by New York City or certain other New York City public employers, then enter this amount under A-101. This is done on Form IT-225, which is used for New York additions and/or subtractions that do not have a separate line on your return.