You will enter your Japanese pension in the same spot you enter a Pension from a US based company. However, when asked what state it is for, you will select foreign. When you select foreign, you will be given a list of countries to choose from. Select Japan on this address screen.
To get to this location click the following:
We were not asked to enter 1099-s provider information. There’s no place to enter country, etc that you mention.
You can enter the Japanese pension under Miscellaneous income:
But before you do, read the treaty between Japan and U.S. first.