I claimed I was making income in the state of Pennsylvania while being stationed else where in the military

If your only income was the nontaxable military income, and PA tax was not withheld from that income, you are not required to file a Pennsylvania tax return. https://revenue-pa.custhelp.com/app/answers/detail/a_id/266/~/should-i-report-my-active-military-pay-on-my-pa-personal-income-tax-return%3F