It appears there is a bug which has not been fixed, even after the latest software update.
Solution that worked for me was to go in the 'Wages & Income' section go down to the 'Rental Properties and Royalties' and even if it say '$0' go ahead and click on the 'Update' button next to it. On the next screen select 'Yes', even if does not apply to you. Next screen simply click 'Continue'. This will get to the 'Rentand Royalty Summary' page. At this point, under the 'Net Income' column you will have 2 buttons, one 'Edit' and the other one 'Delete'.
You need to select the 'Delete' button and will will give a 'Delete Confirmation' page which will hid or eliminate the 'Schedule E' form from showing-up when running the 'Smart Check' option.
Hope this helps