After you file

Sorry you can't have a tax due deducted from the other refund.  Not possible.  Federal and state are completely separate.

 

Did you get the state refund yet?  It should be for the full amount.   At the end Turbo Tax just shows you the net federal and state combined. But that is only for your info. You will still get the full refund and need to pay a tax due. 

https://ttlc.intuit.com/questions/1900884-what-are-my-options-for-getting-my-state-refund-or-for-pay...

 

Check for a state refund

https://ttlc.intuit.com/community/refund-status/help/how-do-i-track-my-state-refund/00/25571