Did you fill out Schedule C for the 1099NEC income? The Social Security tax is automatically figured on the net profit on Schedule C
You pay Self Employment tax (Scheduled SE) on a Net Profit of $400 or more on Schedule C in addition to regular income tax on it. You pay 15.3% SE tax on 92.35% of your Net Profit (If it is greater than $400). The 15.3% self employed SE Tax is to pay both the employer part and employee part of Social Security and Medicare. So you get social security credit for it when you retire.
The SE tax will be included in your tax due or reduce your refund. It is on the 1040 Schedule 2 line 4 which goes to 1040 line 23.
