Retirement tax questions

You should be entering from the actual W2.  Don't try filling it out without the W2.  You can't make up the amounts and you can't use your paystubs.  They won't match the actual W2 you get.  Ask your employer for another copy.  You don't enter anything about IRA in W2 box 12.  Box 12 are for other things like health insurance and 401K plans.