Does your K-1 have anything listed in box 14? If it does, does letters a and c appear with a number next to C? Fourteen C on your k-1 will generate self-employment taxes. So if you entered it differently, it would result in different outcomes. There could also be something else that you entered different such as a W-2 or 1099. Did you have tax credits of any sort?
You may want to just double check all your entries. In reality, all software should come up with the same tax due or refund as they all have the same IRS rules and guidelines to follow.
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