When you entered the 1099-SA in the HSA interview (name of Payer, amount of distribution, distribution code, etc), did you look up to see in who's name the distribution is made?
It's easy to miss - it's just above the Payer Name. Since it defaults to the primary taxpayer when you open the screen, it's easy to forget to change it when you are adding a 1099-SA for the sppouse.
