If your deduction is limited, TurboTax will provide a box for you to enter the interest amount you calculated. This is found AFTER the mortgage entry section (click Done under the list of mortgages you entered).
As mentioned above, some situations require additional calculations that are not supported in the software. The direct entry box is provided if you find yourself in this situation.
If you're not presented with this option in TurboTax Online, you will need to complete your return using TurboTax for Desktop and access the relevant worksheet(s) using Forms Mode (see How do I switch from TurboTax Online to the TurboTax software?).
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