After you file

@PatinWA Fanfare is correct.   The return that has to be amended is your return.  You already put your SSN on that return.  Your spouse cannot prepare a joint return using your SSN, because it will be rejected.

 

When you amend:

 

When you enter your own information in My Info, you have to answer the question "Were you married?"  If you click the button for Married, then a drop down will appear that asks, "Do you want to file this return together with your spouse?"  Then you choose yes to file a joint return.  You would then enter your spouse's information into My Info.  Whenever you are entering income information there should then be a spot for you and for your spouse's income information.  Income screens will have spots with each spouse’s name—be careful to enter under the correct names.

 

Your spouse will not file a return at all.  All of her information goes on the Form 1040X that you prepare and file as a joint return.   

**Disclaimer: Every effort has been made to offer the most correct information possible. The poster disclaims any legal responsibility for the accuracy of the information that is contained in this post.**

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