Ok ... did you check the IRS site to see if the original refund was ever issued ... www.IRS.gov/refunds
So look at the 1040X you filed ... did you not change the amount on line 18 of the refund you had already recieved to zero ? This is why you should not file the amended return too quickly. You now have a mess on your hands ... so I highly recommend you seek a local tax pro who can assist you in getting this corrected. Or you can try contacting the tax payer advocate office ... http://www.irs.gov/Advocate/Local-Taxpayer-Advocate
