After you file

2 different things going on.   Regular Income Tax and Self Employment Tax.

 

The 1099NEC is for self employment income.  You fill out schedule C for it.  Then the Net Profit or Loss goes to the 1040 Line 8 as Other Income.  The income is being included with your W2s. The Profit on Schedule C is counted as Earned Income for the Dependent Standard Deduction.  The amount that counts towards Earned Income is the Net Profit (minus 1/2 the SE tax)

 

Then the Standard Deduction is subtracted from ALL  your income.   If your Taxable Income is 0 there is no REGULAR Income Tax on your total income.  

 

But you will still owe the Self Employment Tax on it.  Self Employment tax (Scheduled SE) is automatically generated if a person has $400 or more of net profit from self-employment. You pay 15.3% SE tax on 92.35% of your Net Profit greater than $400. The 15.3% self employed SE Tax is to pay both the employer part and employee part of Social Security and Medicare. So you get social security credit for it when you retire.