It is completely separate so are you entering the SEP in the correct place in the program ? It is NOT entered in the IRA section. And did you have enough profits on the Sch C ? Use the Print Center to review the SEP worksheet.
Click on Tax Tools on the left side of the online program screen. Then click on Print Center. Then click on Print, save or preview this year's return.
Choose the option Include government and TurboTax worksheets
