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Interesting though, I notice my TVA bond interest is reported in box 1 of my Fidelity 1099-INT, even though it is supposed to be included to also be considered a US Govt Bond by my state (NC) .  NY does too .

 IF that is your situation (it's in box 1 of a 1099-INT), then you'd have to handle it in the NY interview portion.  In my NC software, there is a place during the interview that I can tell indicate in the software that I have other "Deductions from North Carolina Income"  and I can place it there and describe what bonds are involved.  

But this would only be in a situation where you hold the individual  FFCB & FHLB & TVA bonds, and their bond interest is reported in box 1 of a 1099-INT.  Check your broker's supplemental information to see what box they report this interest in...

 (now I have to review myself whether it is worthwhile to amend my old NC tax returns for the last 3 years....and I'm puzzled why the TVA interest is not in box 3 of the 1099-INT...that could be an IRS requirement of some kind, for some reason, not yet discovered)
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Other....1099-DIV situation for NY:
...,....from my recent reading about NY, they seem to have a 50% asset limit for taking a NY deduction for US Govt interest from Bond Funds.  i.e, if you have US Govt/TVA/FFCB & FHLB that is reported on a 1099-DIV form, that comes from Mutual fund holdings, then the Mutual Fund the holds the bonds must have at least 50% of it's assets in those US Govt/TVA/FFCB & FHLB holdings...otherwise, you cannot take the NY deduction for those US Govt/TVA/FFCB & FHLB bond dividends.   that 50% of assets limit does not apply to NY-issued holdings.

See the second entry on page 3 of:

(Reference gone..no longer valid)

____________*Answers are correct to the best of my knowledge when posted, but should not be considered to be legal or official tax advice.*