Did you enter the 1099Misc? Where did it show up? It should be on a schedule C. Did they want you to amend to add it?
How to amend an Online return
https://ttlc.intuit.com/replies/7276596 You can enter Self Employment Income into Online Deluxe or Premier but if you have any expenses you will have to upgrade to the Self Employed version. How to enter income from Self Employment
https://ttlc.intuit.com/replies/4801198
