Get your taxes done using TurboTax

It's possible the payer does not understand the correct reporting form. The stipend is not required to be reported as self employment income. Keep the 1099-NEC in the tax file and delete that form from your return (see the link below).

• If you're using TurboTax Online software and need to delete a form, click here.
• If you're using TurboTax Desktop software and need to delete a form, click here.

Reporting: Taxable, non-W-2 stipends are usually reported on Form 1040, Schedule 1, Line 8r as "Scholarships and grants not reported on Form W-2".

• To enter  scholarships, grants, stipends (With or without a 1099 or a 1098-T):
  1. Click on the Deductions & Credits 
  2. Scroll down to Education (if Education is not there, click on Check for more tax breaks).
  3. Select Expenses and Scholarships (Form 1098-T).
  4. On the Do you want to enter your higher education expenses? screen, select Yes.
  5. Continue with the onscreen interview until you get to the Add any other financial aid screen.
  6. Enter the amount of the stipend in the box Other scholarships, grants, or fellowships
  7. This will be show on Schedule 1, line 8r, then carried with any other entries to the 1040.

Be prepared to support your reasoning should the IRS question it later as indicated by @CesarJ. Keep all supporting data with your tax return.

@DolphJack31