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Does it matter if we filed jointly or not?

 

Unless you are legally married, you cannot file a joint tax return.    When you refer to your "Significant Other" are you really referring to a spouse to whom you are legally married?   If not, then whatever you each did with your HSA or FSA accounts are completely separate and are only entered on your own separate tax returns.

**Disclaimer: Every effort has been made to offer the most correct information possible. The poster disclaims any legal responsibility for the accuracy of the information that is contained in this post.**