it works fine just putting with a simple W2 - but I'm on Premier not Deluxe - maybe something in your W2 or 1099-R is triggering the issue especially if you were able to recreate it; is there anything in those forms that would correspond to the $479 difference (be cautious posting more screenshots here tho).
Sorry I can't help further .. if you don't get a response/solution here, or either way instead of waiting, suggest calling TT support to ensure you get some focused help as this forum is really best-efforts discussion/help type of thing
https://ttlc.intuit.com/turbotax-support/en-us/help-article/account-management/contact-turbotax/L2y9...
