I don't understand the question. What transcript? The transcript at the IRS shows a balance payment? If you have a tax due it will be on your 1040 line 37. Your only proof of payment is your bank account or credit card showing the payment. Did you pay estimated payments or the tax due?
And Turbo Tax will always show the ending tax due or refund. It isn't updated when you pay the IRS or get a refund. That's just the final result of your tax return.
