If you put the 2022 return on extension so you can apply for the ITIN with the filed return then you ARE entitled to the credits so the program is correct. You will mail the paper return with the W-7 application to the address for the W-7 application and once the ITIN is issued then the return is forwarded for processing.
Now if you did not put yourself on extension (or you already filed and are amending the filed return) then the IRS will correct the return automatically once the ITIN is issued ... this is nothing that can be done on the return thru the TT program prior to filing as the system doen't have that functionality.
