You can proceed to report the 1099-MISC and TurboTax will treat it as self-employment income if you answer the questions correctly.
You should enter it in the Other Common Income section and then Income from Form 1099-MISC. You will see a screen that says Did the (name of company) income involve work that's like (name of taxpayer) main Job? You have to enter "yes" to that question, then work through the rest of that section to have the income assigned to the correct business.
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