Retirement tax questions

We do not see it as a problem with the IRS but a problem with TurboTax.  A simple question, do you have an 1099R, if so a form to enter the income and taxes withheld which feeds the information to the correct locations is all we are asking.  Also the IRS 1041 instructions tell you to enter the income on the 1099R in Other Income but does not tell you it should be line 2A instead of line1.  There could be a big difference in the 2 lines depending on if it is qualified or nonqualified money.