No. If you took the missed RMD in 2017 it will be reported on your 2017 tax next year along with your 2017 RMD. You probably should not have filed a 5329 by itself since it is supposed to be file *with* your 2016 tax return. Only prior year (2015 and earlier) should be filed as a stand-alone form. But not much that you can do about that now other than hope it will not delay the processing of your 2016 tax return and/or waiver.
**Disclaimer: This post is for discussion purposes only and is NOT tax advice. The author takes no responsibility for the accuracy of any information in this post.**
