In the same area under Miscellaneous Income, that you entered your first 1099-LTC with the 'per diem' amount, you will enter your second 1099-LTC with the 'reimbursed amount'.
Choose Edit at the 'LTC Insured Person Summary' page, and Yes to 'Qualified Payments'.
Continue past 'Gross Per Diem LTC Benefits' and 'Accelerated Death Benefits' to 'LTC Costs' (screenshot).
Here's more info:
https://ttlc.intuit.com/replies/3301401
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