Retirement tax questions

This is  a change from previous years. I have not had TT tell me I have a $3000 penalty before. This year I transferred some  IRA funds to a new account for which TT had no RMD (no closing balance prev year).  

This was a result of importing 1099-R's. When I deleted those and entered manually I got tax due reduced and my state went from pay to refund. TOO MUCH OF THE DETAIL IS NO LONGER VIEWABLE AND THE DATA SOURCES HAVE DISAPPEARED ON SOME FIELDS.