Retirement tax questions

I have the same question.   I am using Turbo Tax, desktop and the indirect redeposit is reflected in the 5498, not a 1099R.  A 1099R is a distribution, and the direct redeposit also cannot be added as a deduction.  Can anyone help to discover where in the indirect redeposit rollover, lowering the total amount of the distribution is reflected correctly.????