From TurboTax expert PaulaM
Some states use their own 1099-G form instead of the IRS standard 1099-G form.
If your federal/boxes don't match up, just enter where they are asked for. Enter your federal tax withheld in the box 4 field box in TurboTax (you have to check the box under your state). Then continue to enter the state taxes in the box 11 TurboTax field box.
