Your Efile will not be rejected for this mis-match between imported 1099-B transactions and the PDF copy of your 1099-B.
You could Edit the imported data to match what's on your hard copy (which is what the IRS receives), or leave it as is, since the totals are correct.
Are there different Cost Basis amounts on the broken down sales? Perhaps your broker has some thoughts on this.
Here's more info on How to Update or Delete Imported Data.
You also have the option to enter a Summary In Lieu of Individual Transactions.
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