You have made a number of errors here and I'm going to do my best to help you untangle them but if you have already filed any of these tax returns you need to consult a tax professional in order to work this all out.
First, your LLC is not entitled to a home office deduction. That deduction is reserved for self-employed sole-proprietorships and contractors. That's why you aren't able to deduct it using TurboTax Business.
Second, when you are entering information about your business into TurboTax Premiere you are duplicating your business and essentially doubling your entries. Delete all of the business entries that you have made into TurboTax Premiere.
If you have a second business where you are earning money on the side then you can enter that business into TurboTax Premiere and take a home-office deduction against that business. If the only business that you have is the LLC for which you are filing a 1065 then you are not entitled to a home-office deduction and you may not take it.
@bblyth
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