Husband Wife LLC file as partnership - problem

My wife and I have a 50/50 LLC in Minnesota (non-community property) and have rental properties owned by the LLC.  I have used an accountant for a few years.  Last year (and probably previously) she filed a partnership return for the LLC and there are no schedule Cs.  When I try to duplicate that with TT Home/Biz l I cannot do it as the program requires that I input income and expenses individually on a 50/50 basis.  Which will result in no partnership filing and the creation of Schedule Cs. I am confused and not sure how to proceed. Help?