You'll enter the van in the Business Vehicle Expense section which is under the Business Expenses heading.
Are the repairs listed separate?
No. If the work was done prior to placing the vehicle in service and was necessary to make the vehicle road worthy, add the cost of repairs to what you paid for the vehicle.
This van will be used 100% for work. Is it best to just take the standard vehicle deduction?
I to have a vehicle that is 100% business use in my SCH C business. In my experience, which may not be the same for you (but I would expect it to) I find taking the per-mile deduction to be more advantageous tax-wise. Depreciation is already included in the per-mile deduction. So while the vehicle will appear on the 4562, it will show zero depreciation on that form. But that's expected since depreciation is already included in the per-mile deduction each year.
