Enter all of your property taxes paid in the Federal section of TurboTax.
If your deduction for taxes is limited to $10,000 on the Federal return, or you can't itemize on the Federal return, enter all of the information there anyway. The information will flow through to your California return. The California interview will ask questions about specific items that are treated differently on the California return.
See this Franchise Tax Board webpage for information on which deductions are treated differently for the State return.
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