When you made your home office entries, you should have entered the entire cost of your property taxes and TurboTax will spit it between your office and itemized deductions. For instance, if your property tax was $2,000, you enter that amount and 25% of it (assuming that was your office use percentage) goes to your office and the rest goes to your itemized deductions on schedule A. If you did it that way, then you don't need to enter your property taxes again, 75% will show up on schedule A, in this example.
If you have other property taxes that have not been entered yet, for instance on another home you own, you can enter that in the itemized deduction section.
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