It does change the answer some. @GeorgeM777 is correct about filing both states and that will be necessary for both the 1120S and your personal return.
In regards to your home office, the S-Corp should pay you rent for the use of the space and count that as rent expense on the 1120S. Then, on your personal return, you can file a Schedule E to report the rental income and take the appropriate percentage of expenses for the space.
See S-corp home office for more details.
@wdegaude
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