Deductions & credits

I can't get SmartCheck to reproduce what you are describing, because I have surely made different input from you.

OK, we'll have to do this:
 Can you post a screenshot of what you see? That is, take a screenshot, copy it into something like Paint (Windows), then save it somewhere, and finally edit your initial question and attach the screenshot.

If you can't do that, then please do the following and answer in the comments:
1. On the SmartCheck screen, what is the first line under "Check this entry"?
2. What is the second line (if one)?
3. What is the window below this showing? (it's showing a part of form 8889 - what lines? Note that you can scroll that window up and down if it helps you see where you are). Especially tell me which line has a colored box.