Just wanted to share that I have a solution provided to me from Keisha at Turbotax. Keisha did an awesome job and walked me through the entire process. You are not required to upload or enter all of your trades.
First make sure you completely delete anything you imported. Then go back and select to enter trades manually. You are only entering 1 SALE for each account. The SALE you enter will be the total of your Proceeds and Cost Basis. Etrade provides this information on the 1099-B Total Summary Page.
